Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548d-3p in END Ovarian Hendrix Cluster 72 Table contains all genes in the END Ovarian Hendrix cluster number 72. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548d-3p 22838 RNF44 ring finger protein 44 [Source:HGNC Symbol;Acc:19180] P T 10765 KDM5B lysine (K)-specific demethylase 5B [Source:HGNC Symbol;Acc:18039] zzz999 10657 KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 [Source:HGNC Symbol;Acc:18116] zzz999 5121 PCP4 Purkinje cell protein 4 [Source:HGNC Symbol;Acc:8742] zzz999 159 ADSS adenylosuccinate synthase [Source:HGNC Symbol;Acc:292] zzz999 670 BPHL biphenyl hydrolase-like (serine hydrolase) [Source:HGNC Symbol;Acc:1094] zzz999 27246 RNF115 ring finger protein 115 [Source:HGNC Symbol;Acc:18154] zzz999 3697 ITIH1 inter-alpha (globulin) inhibitor H1 [Source:HGNC Symbol;Acc:6166] zzz999 6726 SRP9 signal recognition particle 9kDa [Source:HGNC Symbol;Acc:11304] zzz999 90233 ZNF551 zinc finger protein 551 [Source:HGNC Symbol;Acc:25108] T 54850 FBXL12 F-box and leucine-rich repeat protein 12 [Source:HGNC Symbol;Acc:13611] zzz999 57116 ZNF695 zinc finger protein 695 [Source:HGNC Symbol;Acc:30954] zzz999 25806 VAX2 ventral anterior homeobox 2 [Source:HGNC Symbol;Acc:12661] zzz999 80746 TSEN2 tRNA splicing endonuclease 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:28422] T 79577 CDC73 cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16783] zzz999 11100 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1 [Source:HGNC Symbol;Acc:17011] zzz999 7155 TOP2B topoisomerase (DNA) II beta 180kDa [Source:HGNC Symbol;Acc:11990] P T 57645 POGK pogo transposable element with KRAB domain [Source:HGNC Symbol;Acc:18800] zzz999 54768 HYDIN hydrocephalus inducing homolog (mouse) [Source:HGNC Symbol;Acc:19368] T 22875 ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative) [Source:HGNC Symbol;Acc:3359] T 1627 DBN1 drebrin 1 [Source:HGNC Symbol;Acc:2695] zzz999 55506 H2AFY2 H2A histone family, member Y2 [Source:HGNC Symbol;Acc:14453] zzz999 79828 METTL8 methyltransferase like 8 [Source:HGNC Symbol;Acc:25856] T 7324 UBE2E1 ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast) [Source:HGNC Symbol;Acc:12477] T 10371 SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A [Source:HGNC Symbol;Acc:10723] zzz999 79807 GSTCD glutathione S-transferase, C-terminal domain containing [Source:HGNC Symbol;Acc:25806] T 9794 MAML1 mastermind-like 1 (Drosophila) [Source:HGNC Symbol;Acc:13632] T 25936 NSL1 NSL1, MIND kinetochore complex component, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24548] T 7465 WEE1 WEE1 homolog (S. pombe) [Source:HGNC Symbol;Acc:12761] P T 26751 SH3YL1 SH3 domain containing, Ysc84-like 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:29546] zzz999 64746 ACBD3 acyl-CoA binding domain containing 3 [Source:HGNC Symbol;Acc:15453] T 79915 ATAD5 ATPase family, AAA domain containing 5 [Source:HGNC Symbol;Acc:25752] zzz999 9804 TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) [Source:HGNC Symbol;Acc:20947] T 3267 AGFG1 ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:5175] T 3150 HMGN1 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:4984] T 5326 PLAGL2 pleiomorphic adenoma gene-like 2 [Source:HGNC Symbol;Acc:9047] P T 374286 zzz999 CMT1A duplicated region transcript 1 protein [Source:UniProtKB/Swiss-Prot;Acc:O95170] zzz999 3192 HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) [Source:HGNC Symbol;Acc:5048] T 64789 DEM1 defects in morphology 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:26115] T 7072 TIA1 TIA1 cytotoxic granule-associated RNA binding protein [Source:HGNC Symbol;Acc:11802] T 29890 RBM15B RNA binding motif protein 15B [Source:HGNC Symbol;Acc:24303] T 55740 ENAH enabled homolog (Drosophila) [Source:HGNC Symbol;Acc:18271] P T 51742 ARID4B AT rich interactive domain 4B (RBP1-like) [Source:HGNC Symbol;Acc:15550] zzz999 2005 ELK4 ELK4, ETS-domain protein (SRF accessory protein 1) [Source:HGNC Symbol;Acc:3326] T 10285 SMNDC1 survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:16900] P T 9816 URB2 URB2 ribosome biogenesis 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:28967] zzz999 10691 GMEB1 glucocorticoid modulatory element binding protein 1 [Source:HGNC Symbol;Acc:4370] zzz999 493 ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 [Source:HGNC Symbol;Acc:817] T 81611 ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:HGNC Symbol;Acc:16673] T 26648 OR7E24 olfactory receptor, family 7, subfamily E, member 24 [Source:HGNC Symbol;Acc:8396] zzz999 5378 PMS1 PMS1 postmeiotic segregation increased 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:9121] T 23350 U2SURP U2 snRNP-associated SURP domain containing [Source:HGNC Symbol;Acc:30855] P T 64067 NPAS3 neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:19311] T 11335 CBX3 chromobox homolog 3 [Source:HGNC Symbol;Acc:1553] T 1829 DSG2 desmoglein 2 [Source:HGNC Symbol;Acc:3049] zzz999 9857 CEP350 centrosomal protein 350kDa [Source:HGNC Symbol;Acc:24238] T 9462 RASAL2 RAS protein activator like 2 [Source:HGNC Symbol;Acc:9874] T 50837 TAS2R7 taste receptor, type 2, member 7 [Source:HGNC Symbol;Acc:14913] zzz999 57556 SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:HGNC Symbol;Acc:10738] T 6045 RNF2 ring finger protein 2 [Source:HGNC Symbol;Acc:10061] T 55777 MBD5 methyl-CpG binding domain protein 5 [Source:HGNC Symbol;Acc:20444] zzz999 905 CCNT2 cyclin T2 [Source:HGNC Symbol;Acc:1600] zzz999 3720 JARID2 jumonji, AT rich interactive domain 2 [Source:HGNC Symbol;Acc:6196] P T 79647 AKIRIN1 akirin 1 [Source:HGNC Symbol;Acc:25744] T 6476 SI sucrase-isomaltase (alpha-glucosidase) [Source:HGNC Symbol;Acc:10856] zzz999 607 BCL9 B-cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:1008] zzz999 9939 RBM8A RNA binding motif protein 8A [Source:HGNC Symbol;Acc:9905] zzz999 2057 EPOR erythropoietin receptor [Source:HGNC Symbol;Acc:3416] zzz999 8451 CUL4A cullin 4A [Source:HGNC Symbol;Acc:2554] P T 55854 ZC3H15 zinc finger CCCH-type containing 15 [Source:HGNC Symbol;Acc:29528] T 3146 HMGB1 high mobility group box 1 [Source:HGNC Symbol;Acc:4983] T

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